org.inb.biomoby.shared.ontology
Class LutefiskReport

java.lang.Object
  org.inb.biomoby.shared.message.AbstractMobyElement
      org.inb.biomoby.shared.message.AbstractMobyObject
          org.inb.biomoby.shared.message.MobyObject
              org.inb.biomoby.shared.ontology.LutefiskReport

All Implemented Interfaces:

Serializable

public class LutefiskReport
extends MobyObject
implements Serializable

See Also:

Serialized Form

Constructor Summary

LutefiskReport()

Method Summary

void	addAnnotatedSequence(LutefiskAnnotatedAASequence annotatedSequence)
List<? extends LutefiskAnnotatedAASequence>	getAnnotatedSequence()
MobyInteger	getChargeState()
MobyFloat	getCterminalMass()
MobyFloat	getCterminalTagMass()
MobyFloat	getCysResMass()
MobyFloat	getDataThreshold()
MobyInteger	getExtNumber()
MobyFloat	getExtThreshold()
MobyFloat	getFragIonTolerance()
MobyInteger	getGaps()
MobyFloat	getIonOffset()
MobyFloat	getIonsResidue()
MobyFloat	getIonsWindow()
MobyFloat	getMW()
MobyFloat	getMWTolerance()
MobyFloat	getNterminalMass()
MobyFloat	getNterminalTagMass()
MobyFloat	getPeakWidth()
MobyString	getSequenceTag()
void	setChargeState(MobyInteger chargeState)
void	setCterminalMass(MobyFloat cterminalMass)
void	setCterminalTagMass(MobyFloat cterminalTagMass)
void	setCysResMass(MobyFloat cysResMass)
void	setDataThreshold(MobyFloat dataThreshold)
void	setExtNumber(MobyInteger extNumber)
void	setExtThreshold(MobyFloat extThreshold)
void	setFragIonTolerance(MobyFloat fragIonTolerance)
void	setGaps(MobyInteger gaps)
void	setIonOffset(MobyFloat ionOffset)
void	setIonsResidue(MobyFloat ionsResidue)
void	setIonsWindow(MobyFloat ionsWindow)
void	setMW(MobyFloat mW)
void	setMWTolerance(MobyFloat mWTolerance)
void	setNterminalMass(MobyFloat nterminalMass)
void	setNterminalTagMass(MobyFloat nterminalTagMass)
void	setPeakWidth(MobyFloat peakWidth)
void	setSequenceTag(MobyString sequenceTag)

Methods inherited from class org.inb.biomoby.shared.message.MobyObject

getAttributes, getCrossReference, putAttribute, removeAttribute, removeCrossReference, setCrossReference, toString

Methods inherited from class org.inb.biomoby.shared.message.AbstractMobyObject

getMobyId, getNamespace, setMobyId, setNamespace

Methods inherited from class org.inb.biomoby.shared.message.AbstractMobyElement

getArticleName, setArticleName

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

LutefiskReport

public LutefiskReport()

Method Detail

getAnnotatedSequence

public List<? extends LutefiskAnnotatedAASequence> getAnnotatedSequence()

addAnnotatedSequence

public void addAnnotatedSequence(LutefiskAnnotatedAASequence annotatedSequence)

getMW

public MobyFloat getMW()

setMW

public void setMW(MobyFloat mW)

getMWTolerance

public MobyFloat getMWTolerance()

setMWTolerance

public void setMWTolerance(MobyFloat mWTolerance)

getFragIonTolerance

public MobyFloat getFragIonTolerance()

setFragIonTolerance

public void setFragIonTolerance(MobyFloat fragIonTolerance)

getIonOffset

public MobyFloat getIonOffset()

setIonOffset

public void setIonOffset(MobyFloat ionOffset)

getChargeState

public MobyInteger getChargeState()

setChargeState

public void setChargeState(MobyInteger chargeState)

getCysResMass

public MobyFloat getCysResMass()

setCysResMass

public void setCysResMass(MobyFloat cysResMass)

getIonsWindow

public MobyFloat getIonsWindow()

setIonsWindow

public void setIonsWindow(MobyFloat ionsWindow)

getExtThreshold

public MobyFloat getExtThreshold()

setExtThreshold

public void setExtThreshold(MobyFloat extThreshold)

getExtNumber

public MobyInteger getExtNumber()

setExtNumber

public void setExtNumber(MobyInteger extNumber)

getGaps

public MobyInteger getGaps()

setGaps

public void setGaps(MobyInteger gaps)

getPeakWidth

public MobyFloat getPeakWidth()

setPeakWidth

public void setPeakWidth(MobyFloat peakWidth)

getDataThreshold

public MobyFloat getDataThreshold()

setDataThreshold

public void setDataThreshold(MobyFloat dataThreshold)

getIonsResidue

public MobyFloat getIonsResidue()

setIonsResidue

public void setIonsResidue(MobyFloat ionsResidue)

getCterminalMass

public MobyFloat getCterminalMass()

setCterminalMass

public void setCterminalMass(MobyFloat cterminalMass)

getNterminalMass

public MobyFloat getNterminalMass()

setNterminalMass

public void setNterminalMass(MobyFloat nterminalMass)

getNterminalTagMass

public MobyFloat getNterminalTagMass()

setNterminalTagMass

public void setNterminalTagMass(MobyFloat nterminalTagMass)

getCterminalTagMass

public MobyFloat getCterminalTagMass()

setCterminalTagMass

public void setCterminalTagMass(MobyFloat cterminalTagMass)

getSequenceTag

public MobyString getSequenceTag()

setSequenceTag

public void setSequenceTag(MobyString sequenceTag)