Package org.inb.biomoby.shared.ontology

Class Summary

AminoAcidSequence
AnnotatedAASequence
AnnotatedDomain
AnnotatedNASequence
AnnotatedStructure
Annotation
AnnotationHits
AntigenicAnnotatedAASequence
AntigenicAnnotation
AntigenicReport
Array
ArrayFloat
ArrayInteger
ArrayString
ArrayXYData
BasicAnnotation
BL2GAnnotation
BLAST__Text
BLAST_XML
BLOCKAnnotation
BlocksAnnotatedAASequence
ByoDynInput
ByoDynOEDParameter
ByoDynTarget
CATHDomain
CathDomainDescription_XML
Clustalw_Evaluated_Text
Clustalw_Text
Clustering
ClusterProfile_Text
CodcmpReport_Text
CodonUsageTable_Text
CommentedAASequence
CommentedAASubsequence
CommentedDNASequence
CommentedNASequence
CommentedObject
CommentedRNASequence
CommentedWeightedObject
Consensus_Sequence_Text
CpGAnnotatedNASequence
CpGAnnotation
CpGReport
DASGFF
DCCP_Text
DGPI_Report
DifferentialExpressionTest__Text
DifferentialExpressionTest_Text
DigestReport
Distance_Matrix
DNASequence
Domain
DomainAnnotatedSequence
DSSP_Text
DTA_Text
Element
ElementFloat
ElementInteger
ElementString
ElementXYData
EMBL_Text
EmowseAnnotatedAASequence
ENSEMBLHomolog
Enzymatic_Text
EquicktandemAnnotatedNASequence
EquicktandemAnnotation
EquicktandemReport
ExpressionCore
ExpressionStatistics
FamilyBLOCKAnnotation
FASTA
FASTA_AA
FASTA_AA_multi
FASTA_NA
FASTA_NA_multi
FASTA_pep
FASTA_Text
FatiGO__XML
FatiGO_Text
FatiScan__XML
FatiScan_Text
FeatureAASequence
FeatureAnnotatedAASequence
FeatureAnnotation
FSOLV_Text
FSSP_Text
FunCUT_Annotation_XML
GenBank_Text
GenericSequence
GFF
GFF2
GFF3
GOGraph
GOTerm
HierarchicalClustering
HMM_Text
HMMPfam_Report
HMMSearch_Report
HSSP_Text
Image_Encoded
IntAct_XML
Interaction
InteractionMethod
Interactor
InterProMotifAnnotatedAASequence
InterProMotifAnnotation
ISS_Annotation_XML
ISS_Report
List__Text
List_Text
LutefiskAnnotatedAASequence
LutefiskAnnotation
LutefiskReport
MatchingPattern
Matrix
MatrixFloat
MatrixInteger
MatrixString
MEME_Text
Meta_Alignment_Text
MicroArrayData__Text
MicroArrayData_Text
MmCIF__Text
MmCIF_Text
MolWeightAnnotation
MolWeightsAnnotatedAASequence
MolWeightsArray
MotifAnnotatedAASequence
MotifAnnotation
MotifMatrix
MSF
MultiParameter
NAMD_Conf_Text
NAMD_Output
NAMD_Structure
NCBI_BLAST_Text
NCut_Clusters
NCut_Matrix
NCut_Text
NDB__Text
Newick__Text
Newick_Text
NucleotideSequence
OMIM
Parameter
Parameters4Values
ParametersToVary
PatmatdbReport
PatmatmotifsReport
Pattern
PDB__Text
PDB_Enriched
Pepcoil_Text
PepinfoReport
PepNovoReport
Pepstats_Text
PHD_Text
Phylip_Interleaved_Text
Phylip_Text
Phylip_tree_Text
Phylip_treefile_Text
PIR_Text
PMUT_Text
PPSearchReport
Prediction__Text
PredictionModel__XML
PredictorTraining_Text
ProbMolWeightAnnotation
ProbMolWeightsAnnotatedAASequence
ProdomMotif
PropertySequence
PrositeDoc_Text
PrositeMotif
PSF_Text
RefSeq_Text
RestrictAnnotatedNASequence
RestrictAnnotation
RestrictReport
RNASequence
Rules
SCOPDomain
SCOPLayerNode
ScoredMotifAnnotatedAASequence
ScoredMotifAnnotation
Sequence_alignment_report
SequenceDescription_Text
SIAM_Annotation_XML
SigcleaveAnnotatedAASequence
SigcleaveAnnotation
SigcleaveReport
Stockholm_Text
Structure_Alignment_Report
StructureBoundaries
StructureDomain
StructureFragment
SwissProt_Text
Target
TargetArgument
Text__formatted
Text__html
Text__plain
Text__xhtml
Text__xml
TFscan_Text
TransmembraneAnnotatedAASequence
TransmembraneAnnotation
TransmembraneReport
TreeDet_Annotation_HTML
TreeDet_Annotation_XML
TreeDet_Report
TTS
Typed_Image
URL__Text
VirtualSequence
WeightedAminoAcidSequences
WeightedList__Text
WeightedList_Text
WeightedObject
Zip_Encoded