Version: 1.1.1

Uses of Class
org.inb.biomoby.shared.message.MobyObject

Packages that use MobyObject
org.inb.biomoby.client.gui.ontology   
org.inb.biomoby.shared.message   
org.inb.biomoby.shared.ontology   
 

Uses of MobyObject in org.inb.biomoby.client.gui.ontology
 

Constructors in org.inb.biomoby.client.gui.ontology with parameters of type MobyObject
MobyObjectComponent(MobyObject object)
           
 

Uses of MobyObject in org.inb.biomoby.shared.message
 

Subclasses of MobyObject in org.inb.biomoby.shared.message
 class AnyMobyObject
          This class is a substitution to ontology classes.
 

Methods in org.inb.biomoby.shared.message that return types with arguments of type MobyObject
 ArrayList<MobyObject> CrossReference.getObjects()
           
 

Uses of MobyObject in org.inb.biomoby.shared.ontology
 

Subclasses of MobyObject in org.inb.biomoby.shared.ontology
 class AminoAcidSequence
           
 class AnnotatedAASequence
           
 class AnnotatedDomain
           
 class AnnotatedNASequence
           
 class AnnotatedStructure
           
 class Annotation
           
 class AnnotationHits
           
 class AntigenicAnnotatedAASequence
           
 class AntigenicAnnotation
           
 class AntigenicReport
           
 class Array
           
 class ArrayFloat
           
 class ArrayInteger
           
 class ArrayString
           
 class ArrayXYData
           
 class BasicAnnotation
           
 class BL2GAnnotation
           
 class BLAST__Text
           
 class BLAST_XML
           
 class BLOCKAnnotation
           
 class BlocksAnnotatedAASequence
           
 class ByoDynInput
           
 class ByoDynOEDParameter
           
 class ByoDynTarget
           
 class CATHDomain
           
 class CathDomainDescription_XML
           
 class Clustalw_Evaluated_Text
           
 class Clustalw_Text
           
 class Clustering
           
 class ClusterProfile_Text
           
 class CodcmpReport_Text
           
 class CodonUsageTable_Text
           
 class CommentedAASequence
           
 class CommentedAASubsequence
           
 class CommentedDNASequence
           
 class CommentedNASequence
           
 class CommentedObject
           
 class CommentedRNASequence
           
 class CommentedWeightedObject
           
 class Consensus_Sequence_Text
           
 class CpGAnnotatedNASequence
           
 class CpGAnnotation
           
 class CpGReport
           
 class DASGFF
           
 class DCCP_Text
           
 class DGPI_Report
           
 class DifferentialExpressionTest__Text
           
 class DifferentialExpressionTest_Text
           
 class DigestReport
           
 class Distance_Matrix
           
 class DNASequence
           
 class Domain
           
 class DomainAnnotatedSequence
           
 class DSSP_Text
           
 class DTA_Text
           
 class Element
           
 class ElementFloat
           
 class ElementInteger
           
 class ElementString
           
 class ElementXYData
           
 class EMBL_Text
           
 class EmowseAnnotatedAASequence
           
 class ENSEMBLHomolog
           
 class Enzymatic_Text
           
 class EquicktandemAnnotatedNASequence
           
 class EquicktandemAnnotation
           
 class EquicktandemReport
           
 class ExpressionCore
           
 class ExpressionStatistics
           
 class FamilyBLOCKAnnotation
           
 class FASTA
           
 class FASTA_AA
           
 class FASTA_AA_multi
           
 class FASTA_NA
           
 class FASTA_NA_multi
           
 class FASTA_pep
           
 class FASTA_Text
           
 class FatiGO__XML
           
 class FatiGO_Text
           
 class FatiScan__XML
           
 class FatiScan_Text
           
 class FeatureAASequence
           
 class FeatureAnnotatedAASequence
           
 class FeatureAnnotation
           
 class FSOLV_Text
           
 class FSSP_Text
           
 class FunCUT_Annotation_XML
           
 class GenBank_Text
           
 class GenericSequence
           
 class GFF
           
 class GFF2
           
 class GFF3
           
 class GOGraph
           
 class GOTerm
           
 class HierarchicalClustering
           
 class HMM_Text
           
 class HMMPfam_Report
           
 class HMMSearch_Report
           
 class HSSP_Text
           
 class Image_Encoded
           
 class IntAct_XML
           
 class Interaction
           
 class InteractionMethod
           
 class Interactor
           
 class InterProMotifAnnotatedAASequence
           
 class InterProMotifAnnotation
           
 class ISS_Annotation_XML
           
 class ISS_Report
           
 class List__Text
           
 class List_Text
           
 class LutefiskAnnotatedAASequence
           
 class LutefiskAnnotation
           
 class LutefiskReport
           
 class MatchingPattern
           
 class Matrix
           
 class MatrixFloat
           
 class MatrixInteger
           
 class MatrixString
           
 class MEME_Text
           
 class Meta_Alignment_Text
           
 class MicroArrayData__Text
           
 class MicroArrayData_Text
           
 class MmCIF__Text
           
 class MmCIF_Text
           
 class MolWeightAnnotation
           
 class MolWeightsAnnotatedAASequence
           
 class MolWeightsArray
           
 class MotifAnnotatedAASequence
           
 class MotifAnnotation
           
 class MotifMatrix
           
 class MSF
           
 class MultiParameter
           
 class NAMD_Conf_Text
           
 class NAMD_Output
           
 class NAMD_Structure
           
 class NCBI_BLAST_Text
           
 class NCut_Clusters
           
 class NCut_Matrix
           
 class NCut_Text
           
 class NDB__Text
           
 class Newick__Text
           
 class Newick_Text
           
 class NucleotideSequence
           
 class OMIM
           
 class Parameter
           
 class Parameters4Values
           
 class ParametersToVary
           
 class PatmatdbReport
           
 class PatmatmotifsReport
           
 class Pattern
           
 class PDB__Text
           
 class PDB_Enriched
           
 class Pepcoil_Text
           
 class PepinfoReport
           
 class PepNovoReport
           
 class Pepstats_Text
           
 class PHD_Text
           
 class Phylip_Interleaved_Text
           
 class Phylip_Text
           
 class Phylip_tree_Text
           
 class Phylip_treefile_Text
           
 class PIR_Text
           
 class PMUT_Text
           
 class PPSearchReport
           
 class Prediction__Text
           
 class PredictionModel__XML
           
 class PredictorTraining_Text
           
 class ProbMolWeightAnnotation
           
 class ProbMolWeightsAnnotatedAASequence
           
 class ProdomMotif
           
 class PropertySequence
           
 class PrositeDoc_Text
           
 class PrositeMotif
           
 class PSF_Text
           
 class RefSeq_Text
           
 class RestrictAnnotatedNASequence
           
 class RestrictAnnotation
           
 class RestrictReport
           
 class RNASequence
           
 class Rules
           
 class SCOPDomain
           
 class SCOPLayerNode
           
 class ScoredMotifAnnotatedAASequence
           
 class ScoredMotifAnnotation
           
 class Sequence_alignment_report
           
 class SequenceDescription_Text
           
 class SIAM_Annotation_XML
           
 class SigcleaveAnnotatedAASequence
           
 class SigcleaveAnnotation
           
 class SigcleaveReport
           
 class Stockholm_Text
           
 class Structure_Alignment_Report
           
 class StructureBoundaries
           
 class StructureDomain
           
 class StructureFragment
           
 class SwissProt_Text
           
 class Target
           
 class TargetArgument
           
 class Text__formatted
           
 class Text__html
           
 class Text__plain
           
 class Text__xhtml
           
 class Text__xml
           
 class TFscan_Text
           
 class TransmembraneAnnotatedAASequence
           
 class TransmembraneAnnotation
           
 class TransmembraneReport
           
 class TreeDet_Annotation_HTML
           
 class TreeDet_Annotation_XML
           
 class TreeDet_Report
           
 class TTS
           
 class Typed_Image
           
 class URL__Text
           
 class VirtualSequence
           
 class WeightedAminoAcidSequences
           
 class WeightedList__Text
           
 class WeightedList_Text
           
 class WeightedObject
           
 class Zip_Encoded
           
 

Methods in org.inb.biomoby.shared.ontology that return MobyObject
 MobyObject Interaction.getMethod()
           
 

Methods in org.inb.biomoby.shared.ontology with parameters of type MobyObject
 void Interaction.setMethod(MobyObject method)
           
 


Version: 1.1.1

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Generated: Sat May 29 04:26:35 EDT 2010