Uses of Interface
org.biomoby.shared.data.MobyDataInstance

Packages that use MobyDataInstance

ca.ucalgary.seahawk.gui	Seahawk is a graphical MOBY client that can be used standalone, or easily embedded in another Java application.
ca.ucalgary.seahawk.services
ca.ucalgary.seahawk.util
ca.ucalgary.services.util
org.biomoby.client	The components used for developing Moby clients.
org.biomoby.shared.data	The package org.biomoby.shared.data allows you to easily build MOBY data instances for sending to services, or querying the registry.

Uses of MobyDataInstance in ca.ucalgary.seahawk.gui

Methods in ca.ucalgary.seahawk.gui that return MobyDataInstance

MobyDataInstance

MobyContentPane.getDraggedData()

Methods in ca.ucalgary.seahawk.gui that return types with arguments of type MobyDataInstance

Map<String,MobyDataInstance>	MobyObjectTransferHandler.getDataFromFiles(Map<String,MobyPrimaryData> acceptableData, Iterable<File> files)
Map<String,MobyDataInstance>	MobyObjectTransferHandler.getDataFromMobyContents(Map<String,MobyPrimaryData> acceptableData, MobyContentInstance mci)
Map<String,MobyDataInstance>	MobyObjectTransferHandler.getDataFromText(Map<String,MobyPrimaryData> acceptableData, String text)
Map<String,MobyDataInstance>	MobyObjectTransferHandler.getDataFromURL(Map<String,MobyPrimaryData> acceptableData, URL url)
Map<String,MobyDataInstance>	MobyObjectTransferHandler.getDataFromURLContents(Map<String,MobyPrimaryData> acceptableData, URL u)

Methods in ca.ucalgary.seahawk.gui with parameters of type MobyDataInstance

void	MobyServicesGUI.addClipboardItem(JMenu menu, MobyDataInstance mobyData)
void	MobyContentClipboard.addCollectionData(MobyDataInstance mdi) The main way to add data to the clipboard, data gets appended to the query with the name given in CLIPBOARD_COLLECTION_NAME
void	MobyContentClipboard.addCollectionData(MobyDataInstance mdi, boolean updateDisplay)
void	MobyContentClipboard.addData(String title, MobyDataInstance mdi) Adds a query to the clipboard with the since MobyDataInstance attached to it.
void	MobyServicesGUI.addPopupOptions(MobyDataInstance mobyData, JPopupMenu popupList, boolean asynchronous) Same as three arg addPopupOptions, but uses default response handler
void	MobyServicesGUI.addPopupOptions(MobyDataInstance mobyData, JPopupMenu popupList, boolean asynchronous, MobyRequestEventHandler handler) Find the list of available services querying MobyCentral directly with a piece of data.
MobyDataObjectSet	MobyContentGUI.addToClipboard(MobyDataInstance itemToAdd) Adds the given data to the Seahawk clipboard object collection.
void	MobyObjectReceiver.consumeMobyObject(String incomingName, MobyDataInstance incomingData) Callback routine used by MobyObjectTransferHandler once it has resolved the data to paste.
void	MobyDataObjectWidget.consumeMobyObject(String incomingName, MobyDataInstance incomingData) Callback routine MobyObjectTransferHandler calls when suitable data has been dropped on this widget.
boolean	MobyContentClipboard.removeCollectionData(MobyDataInstance itemToDelete)
boolean	MobyContentGUI.removeFromClipboard(MobyDataInstance itemToDelete)
void	MobyServicesGUI.setupService(MobyService mobyService, MobyDataInstance mdi, MobyRequestEventHandler mreh) Call the service given, or first launch a GUI to get missing input data if not provided in the MobyDataInstance.

Method parameters in ca.ucalgary.seahawk.gui with type arguments of type MobyDataInstance

void	MobyObjectTransferHandler.mergeDataMaps(Map<String,MobyDataInstance> keeper, Map<String,MobyDataInstance> newData)
void	MobyObjectTransferHandler.mergeDataMaps(Map<String,MobyDataInstance> keeper, Map<String,MobyDataInstance> newData)
boolean	MobyObjectTransferHandler.sendDataToReceiver(MobyObjectReceiver receiver, Map<String,MobyPrimaryData> acceptableData, Map<String,MobyDataInstance> dataFound)

Constructors in ca.ucalgary.seahawk.gui with parameters of type MobyDataInstance

MobyDataObjectWidget(String articleName, MobyClient client, MobyDataInstance data, boolean editable)
C-tor for instantiated data.

Uses of MobyDataInstance in ca.ucalgary.seahawk.services

Methods in ca.ucalgary.seahawk.services that return MobyDataInstance

MobyDataInstance	MobyClient.getMobyObject(Map<String,byte[]> resultParts, MobyPrimaryData dataTemplate) Create a MOBY data instance from a map of name->bytes[] by applying the rules of the given MobyClient.
MobyDataInstance	MobyClient.getMobyObject(Node n, MobyPrimaryData dataTemplate) Create a MOBY data instance from a DOM by applying the rules of the given MobyClient (xpaths).
MobyDataInstance	MobyClient.getMobyObject(String s, MobyPrimaryData dataTemplate) Create a MOBY data instance from a string by applying the rules of the given MobyClient (regexes).

Methods in ca.ucalgary.seahawk.services with parameters of type MobyDataInstance

String

TextClient.getText(MobyDataInstance mobyData, String targetTextType) Because XSLT works on XPath, and we don't know the MOBY tag name (it may be a subclass of the object type we have a rule for), we iteratively try representing the data in simpler top level objects until we get a rule that produces something.

Uses of MobyDataInstance in ca.ucalgary.seahawk.util

Classes in ca.ucalgary.seahawk.util that implement MobyDataInstance

class	MobyDataObjectDeferred A class that pretends it's a real moby data instance, but is actually a deferred list of data instances that should be submitted en-masse to services.
class	MobyDataObjectDeferredSAI
class	MobyDataObjectSetDeferred A class that pretends it's a real moby data collection instance, but is actually a deferred list of data collection instances that should be submitted en-masse to services.
class	MobyDataObjectSetDeferredSAI

Methods in ca.ucalgary.seahawk.util that return MobyDataInstance

static MobyDataInstance[]	MobyUtils.convertStringToObjects(String data)
static MobyDataInstance	DataUtils.loadMobyDataFromXPointer(URL docURL, Document domDoc, String targetXptr, Map<String,String> filteredXPtrs, FilterSearch docFilter)
static MobyDataInstance	DataUtils.loadMobyDataFromXPointer(URL targetURL, Map<String,String> filteredXPtrs, FilterSearch docFilter) Get the data instance object associated with a given XPointer in a Moby XML doc.

Methods in ca.ucalgary.seahawk.util with parameters of type MobyDataInstance

static void	DataUtils.addUserData(MobyDataInstance mdi, URL conditionalOutputURL, FilterSearch filter) Record a condition for data acceptability, another service call with an output filter criteria. i.e. records if(f1(x) matches f1's output filter){...}
static NodeList	DataUtils.getPeerElements(Document doc, MobyDataInstance mobyData, Map<String,String> xPtrsToFilter, String peerMode) We need to enumerate the possible peer-sets for the selected data item.
static void	DataUtils.replaceUserData(MobyDataInstance mdi, String selectionXPath) Replace the selection xpath info in the data instance
static void	DataUtils.setUserData(MobyDataInstance mobyData, URL srcURL, String selectionXPath, String dataSrcXPtr, FilterSearch fs) Record the PbE pertinent info about the data to the Moby data object so it can be tracked through the rest of the app.

Constructors in ca.ucalgary.seahawk.util with parameters of type MobyDataInstance

MobyDataTransferable(MobyDataInstance mdi)
C-tor to use when you have just a single piece of data to transfer, such as a Simple, a secondary param, or a Collection.

Uses of MobyDataInstance in ca.ucalgary.services.util

Methods in ca.ucalgary.services.util with parameters of type MobyDataInstance

void	PBERecorder.dataCopied(MobyDataInstance source, String copiedValue, String transformRuleURI) Called by source of data going into the browser, i.e.

Uses of MobyDataInstance in org.biomoby.client

Methods in org.biomoby.client with parameters of type MobyDataInstance

String	MobyRequest.convertMOBYDataToMOBYRequest(MobyDataInstance data)
void	MobyRequest.setInput(MobyDataInstance datum) Convenience method to run services that take one argument.
void	MobyRequest.setInput(MobyDataInstance[] data) Takes the data in the array, with their current articleNames, as input for the service
void	MobyRequest.setInput(MobyDataInstance datum, String paramName) Convenience method to run services that take one named argument.

Uses of MobyDataInstance in org.biomoby.shared.data

Subinterfaces of MobyDataInstance in org.biomoby.shared.data

interface

MobyDataServiceAssocInstance This interface defines a data instance that has already had remote MOBY services associated with it, probably through a call to MOBY central.

Classes in org.biomoby.shared.data that implement MobyDataInstance

class	MobyDataBoolean A class representing a MOBY Boolean primitive.
class	MobyDataBytes A convenience class generally intended for the transmission of binary data that will be Base64 encoded to fit in the MOBY XML envelope.
class	MobyDataComposite This is the class that represents any non-primitive object instance (i.e. anything except object, boolean, integer, float, date-time, or string) from the MOBY data type ontology.
class	MobyDataDateTime A class representing a MOBY DateTime, which is a primitive in MOBY.
class	MobyDataFloat A class representing a MOBY Float primitive.
class	MobyDataInt A class representing a MOBY Integer primitive.
class	MobyDataObject A class representing a base MOBY object (i.e. just a namespace and id) that has been instantiated.
class	MobyDataObjectSAI A convenience class that just associates a set of possible services to run with a data instance.
class	MobyDataObjectSet This class adds to MobyPrimaryDataSet the ability to get and set instantiated MOBY objects.
class	MobyDataObjectSetSAI A convenience class that just associates a set of possible services to run with a data collection.
class	MobyDataObjectVector This class is primarily intended for use by MobyDataComposite to represent Object members in the HAS (1-to-many) relationship.
class	MobyDataSecondaryInstance A class that holds and displays secondary input data to a service.
class	MobyDataString A class representing a MOBY String primitive.
class	MobyDataXref Note: This class has not been thoroughly tested.

Methods in org.biomoby.shared.data that return MobyDataInstance

static MobyDataInstance	MobyDataObject.createInstanceFromDOM(Element objectTag) This method creates a MobyDataObject of the appropriate subclass for a given input XML tree (e.g. base objects like MobyDataObject and MobyDataInt, or complex objects like MobyDataDateTime or MobyDataComposite, or even a MobyDataSecondaryInstance).
static MobyDataInstance	MobyDataObject.createInstanceFromDOM(Element objectTag, Registry registry)
static MobyDataInstance	MobyDataObject.createInstanceFromXML(String mobyXML) Similar to createObjectFromDOM(), but parses the XML for you using the JAXP parser discovery mechanism.
MobyDataInstance[]	MobyDataJob.getData()
MobyDataInstance[]	MobyDataJob.getPrimaryData()

Constructors in org.biomoby.shared.data with parameters of type MobyDataInstance

MobyContentInstance(MobyDataInstance mdi, String paramName)
A convenience constructor when you want to create an envelope with just one object in it.