Uses of Class
org.biomoby.shared.parser.MobyPackage

Packages that use MobyPackage

org.biomoby.client	The components used for developing Moby clients.
org.biomoby.service	It contains general components that can be used by those writing code for Moby services.
org.biomoby.shared.parser	The package org.biomoby.shared.parser contains classes for parsing Biomoby data from an XML format (a Biomoby XML envelope) into Java objects, and back to XML.

Uses of MobyPackage in org.biomoby.client

Methods in org.biomoby.client that return MobyPackage

static MobyPackage

AsyncClient.getResultPackage(EndpointReference epr, String queryId)

Methods in org.biomoby.client with parameters of type MobyPackage

boolean	BaseCmdLineClient.fillRequest(MobyJob request, MobyPackage inputContext)
abstract boolean	BaseClient.fillRequest(MobyJob request, MobyPackage inputContext) Crate data (fill them into 'request') for one Moby job (query).
boolean	BaseCmdLineClient.fillRequest(MobyPackage mobyInput, int jobCount)
boolean	BaseClient.fillRequest(MobyPackage mobyInput, int jobCount) Fill the whole 'mobyInput' - put there any number of jobs (queries) as you wish (you do not need to follow the 'jobCount' hint suggesting how many jobs should be put there).
boolean	BaseCmdLineClient.useResponse(MobyJob response, MobyPackage responseContext)
abstract boolean	BaseClient.useResponse(MobyJob response, MobyPackage responseContext) Process a single job returned from a BioMoby service.
void	BaseCmdLineClient.useResponse(MobyPackage mobyResponse)
void	BaseClient.useResponse(MobyPackage mobyResponse) A high-level processing.

Uses of MobyPackage in org.biomoby.service

Methods in org.biomoby.service that return MobyPackage

MobyPackage

BaseService.prepareOutput(MobyPackage mobyInput) Return a package that has the same number of jobs (and named the same) as the given input.

Methods in org.biomoby.service with parameters of type MobyPackage

String	BaseService.error(String message, MobyPackage outputSoFar) Error handling.
MobyPackage	BaseService.prepareOutput(MobyPackage mobyInput) Return a package that has the same number of jobs (and named the same) as the given input.
abstract void	BaseService.processIt(MobyJob request, MobyJob response, MobyPackage outputContext) A job-level processing: This is the main method to be overriden by a service provider!
void	BaseService.processIt(MobyPackage mobyInput, MobyPackage mobyOutput) A high-level processing.

Uses of MobyPackage in org.biomoby.shared.parser

Methods in org.biomoby.shared.parser that return MobyPackage

static MobyPackage	MobyPackage.createFromXML(Object xmlData) Constructing a MobyPackage object from XML.
static MobyPackage	MobyPackage.createFromXML(Object xmlData, Map<String,String> lowestKnownDataTypes) Constructing a MobyPackage object from XML.
static MobyPackage	MobyPackage.createFromXML(Object xmlData, String lowestKnownDataType) Constructing a MobyPackage object from XML.
MobyPackage	MobyParser.parse(InputStream xml) Parse the contents coming from the given input stream.
MobyPackage	MobyParser.parse(Reader xmlReader) Parse the contents coming from the given reader.
MobyPackage	MobyParser.parse(String xmlFilename) Parse the contents of the given file.